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Hadoop 2. Running on Ubuntu for Single-Node Cluster - 2018

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Running Hadoop on Ubuntu

In the previous chapter (Setting up Hadoop on Ubuntu), we set up Hadoop on Ubunut. Now, we want to check if we did it correctly.




Starting Hadoop
$ pwd
/usr/local/hadoop/sbin
$ ls
distribute-exclude.sh    start-all.cmd        stop-all.sh
hadoop-daemon.sh         start-all.sh         stop-balancer.sh
hadoop-daemons.sh        start-balancer.sh    stop-dfs.cmd
hdfs-config.cmd          start-dfs.cmd        stop-dfs.sh
hdfs-config.sh           start-dfs.sh         stop-secure-dns.sh
httpfs.sh                start-secure-dns.sh  stop-yarn.cmd
mr-jobhistory-daemon.sh  start-yarn.cmd       stop-yarn.sh
refresh-namenodes.sh     start-yarn.sh        yarn-daemon.sh
slaves.sh                stop-all.cmd         yarn-daemons.sh

Run the following command:

$ /usr/local/hadoop/sbin/start-all.sh

This will startup a Namenode, Datanode, Jobtracker and a Tasktracker on our machine. My output looks like this:

$ /usr/local/hadoop/sbin/start-all.sh
This script is Deprecated. Instead use start-dfs.sh and start-yarn.sh
14/02/24 22:17:35 WARN util.NativeCodeLoader: Unable to load native-hadoop library for your platform... using builtin-java classes where applicable
Starting namenodes on [localhost]
localhost: starting namenode, logging to /usr/local/hadoop/logs/hadoop-hduser-namenode-K-PC.out
localhost: starting datanode, logging to /usr/local/hadoop/logs/hadoop-hduser-datanode-K-PC.out
Starting secondary namenodes [0.0.0.0]
0.0.0.0: starting secondarynamenode, logging to /usr/local/hadoop/logs/hadoop-hduser-secondarynamenode-K-PC.out
14/02/24 22:18:07 WARN util.NativeCodeLoader: Unable to load native-hadoop library for your platform... using builtin-java classes where applicable
starting yarn daemons
starting resourcemanager, logging to /usr/local/hadoop/logs/yarn-hduser-resourcemanager-K-PC.out
localhost: starting nodemanager, logging to /usr/local/hadoop/logs/yarn-hduser-nodemanager-K-PC.out

To check whether the expected Hadoop processes are running, we can use jps:

$ jps
5036 SecondaryNameNode
4869 DataNode
4183 ResourceManager
5573 Jps
5256 NodeManager

We can also check with netstat if Hadoop is listening on the configured ports:

$ netstat  -plten | grep java
tcp        0      0 0.0.0.0:50010           0.0.0.0:*               LISTEN      1001       61428       4869/java       
tcp        0      0 0.0.0.0:50075           0.0.0.0:*               LISTEN      1001       62496       4869/java       
tcp        0      0 0.0.0.0:50020           0.0.0.0:*               LISTEN      1001       62313       4869/java       
tcp        0      0 0.0.0.0:50090           0.0.0.0:*               LISTEN      1001       62866       5036/java       
tcp6       0      0 :::8030                 :::*                    LISTEN      1001       56753       4183/java       
tcp6       0      0 :::8031                 :::*                    LISTEN      1001       57468       4183/java       
tcp6       0      0 :::8032                 :::*                    LISTEN      1001       57504       4183/java       
tcp6       0      0 :::8033                 :::*                    LISTEN      1001       57544       4183/java       
tcp6       0      0 :::8040                 :::*                    LISTEN      1001       65972       5256/java       
tcp6       0      0 :::8042                 :::*                    LISTEN      1001       67666       5256/java       
tcp6       0      0 :::34229                :::*                    LISTEN      1001       65960       5256/java       
tcp6       0      0 :::8088                 :::*                    LISTEN      1001       57456       4183/java   



Stopping Hadoop

To stop all the daemons running on our machine, run the following command:

$ /usr/local/hadoop/sbin/stop-all.sh
This script is Deprecated. Instead use stop-dfs.sh and stop-yarn.sh
14/02/24 22:22:29 WARN util.NativeCodeLoader: Unable to load native-hadoop library for your platform... using builtin-java classes where applicable
Stopping namenodes on [localhost]
localhost: no namenode to stop
localhost: stopping datanode
Stopping secondary namenodes [0.0.0.0]
0.0.0.0: stopping secondarynamenode
14/02/24 22:22:54 WARN util.NativeCodeLoader: Unable to load native-hadoop library for your platform... using builtin-java classes where applicable
stopping yarn daemons
stopping resourcemanager
localhost: stopping nodemanager
no proxyserver to stop



Running MapRdeuce

Now it's time to run our first Hadoop MapReduce job. We will use the WordCount example job which reads text files and counts how often words occur. The input is text files and the output is text files, each line of which contains a word and the count of how often it occurred, separated by a tab.

We will use three ebooks from Project Gutenberg for this example that can be downloaded from the following links:

  1. The Outline of Science, Vol. 1 (of 4) by J. Arthur Thomson
  2. Ulysses by James Joyce
  3. The Notebooks of Leonardo Da Vinci

Download each as text files in Plain Text UTF-8 encoding and store the files in a local temporary directory of choice, for example /tmp/gutenberg:

$ ls -l
total 3512
-rw-r--r-- 1 hduser hadoop  661806 Feb 24 21:44 pg20417.txt
-rw-r--r-- 1 hduser hadoop 1540091 Feb 24 21:44 pg4300.txt
-rw-r--r-- 1 hduser hadoop 1391683 Feb 24 21:44 pg5000.txt

We need to restart our Hadoop cluster if it's not running already:

$ /usr/local/hadoop/sbin/start-all.sh



Local example data to HDFS

Before we run the actual MapReduce job, we need to copy the files from our local file system to Hadoop's HDFS:

$ pwd
/usr/local/hadoop/bin

$ ls
container-executor  hadoop  hadoop.cmd  hdfs  hdfs.cmd  mapred  mapred.cmd  rcc  test-container-executor  yarn  yarn.cmd

$ hadoop dfs -copyFromLocal /tmp/gutenberg /home/hduser/gutenberg
$  hadoop dfs -copyFromLocal /tmp/gutenberg /home/hduser/gutenberg
DEPRECATED: Use of this script to execute hdfs command is deprecated.
Instead use the hdfs command for it.

14/02/24 22:59:04 WARN util.NativeCodeLoader: Unable to load native-hadoop library for your platform... using builtin-java classes where applicable
copyFromLocal: Call From K-PC/127.0.1.1 to localhost:54310 failed on connection exception: java.net.ConnectException: Connection refused; For more details see:  http://wiki.apache.org/hadoop/ConnectionRefused

I stopped here because of the connection error. I have to figure it out, I will comeback later.

Reference:

  1. Running Hadoop on Ubuntu Linux

  • Writing an Hadoop MapReduce Program in Python






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    Linux Tips - links, vmstats, rsync

    Linux Tips 2 - ctrl a, curl r, tail -f, umask

    Linux - bash I

    Linux - bash II

    Linux - Uncompressing 7z file

    Linux - sed I (substitution: sed 's///', sed -i)

    Linux - sed II (file spacing, numbering, text conversion and substitution)

    Linux - sed III (selective printing of certain lines, selective definition of certain lines)

    Linux - 7 File types : Regular, Directory, Block file, Character device file, Pipe file, Symbolic link file, and Socket file

    Linux shell programming - introduction

    Linux shell programming - variables and functions (readonly, unset, and functions)

    Linux shell programming - special shell variables

    Linux shell programming : arrays - three different ways of declaring arrays & looping with $*/$@

    Linux shell programming : operations on array

    Linux shell programming : variables & commands substitution

    Linux shell programming : metacharacters & quotes

    Linux shell programming : input/output redirection & here document

    Linux shell programming : loop control - for, while, break, and break n

    Linux shell programming : string

    Linux shell programming : for-loop

    Linux shell programming : if/elif/else/fi

    Linux shell programming : Test

    Managing User Account - useradd, usermod, and userdel

    Linux Secure Shell (SSH) I : key generation, private key and public key

    Linux Secure Shell (SSH) II : ssh-agent & scp

    Linux Secure Shell (SSH) III : SSH Tunnel as Proxy - Dynamic Port Forwarding (SOCKS Proxy)

    Linux Secure Shell (SSH) IV : Local port forwarding (outgoing ssh tunnel)

    Linux Secure Shell (SSH) V : Reverse SSH Tunnel (remote port forwarding / incoming ssh tunnel) /)

    Linux Processes and Signals

    Linux Drivers 1

    tcpdump

    Linux Debugging using gdb

    Embedded Systems Programming I - Introduction

    Embedded Systems Programming II - gcc ARM Toolchain and Simple Code on Ubuntu/Fedora

    LXC (Linux Container) Install and Run

    Linux IPTables

    Hadoop - 1. Setting up on Ubuntu for Single-Node Cluster

    Hadoop - 2. Runing on Ubuntu for Single-Node Cluster

    ownCloud 7 install

    Ubuntu 14.04 guest on Mac OSX host using VirtualBox I

    Ubuntu 14.04 guest on Mac OSX host using VirtualBox II

    Windows 8 guest on Mac OSX host using VirtualBox I

    Ubuntu Package Management System (apt-get vs dpkg)

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    Docker & Kubernetes : Readiness and Liveness Probes

    Docker & Kubernetes : Helm chart repository with Github pages

    Docker & Kubernetes : Deploying WordPress and MariaDB with Ingress to Minikube using Helm Chart

    Docker & Kubernetes : Deploying WordPress and MariaDB to AWS using Helm 2 Chart

    Docker & Kubernetes : Deploying WordPress and MariaDB to AWS using Helm 3 Chart

    Docker & Kubernetes : Helm Chart for Node/Express and MySQL with Ingress

    Docker & Kubernetes : Docker_Helm_Chart_Node_Expess_MySQL_Ingress.php

    Docker & Kubernetes: Deploy Prometheus and Grafana using Helm and Prometheus Operator - Monitoring Kubernetes node resources out of the box

    Docker & Kubernetes : Deploy Prometheus and Grafana using kube-prometheus-stack Helm Chart

    Docker & Kubernetes : Istio (service mesh) sidecar proxy on GCP Kubernetes

    Docker & Kubernetes : Istio on EKS

    Docker & Kubernetes : Istio on Minikube with AWS EC2 for Bookinfo Application

    Docker & Kubernetes : Deploying .NET Core app to Kubernetes Engine and configuring its traffic managed by Istio (Part I)

    Docker & Kubernetes : Deploying .NET Core app to Kubernetes Engine and configuring its traffic managed by Istio (Part II - Prometheus, Grafana, pin a service, split traffic, and inject faults)

    Docker & Kubernetes : Helm Package Manager with MySQL on GCP Kubernetes Engine

    Docker & Kubernetes : Deploying Memcached on Kubernetes Engine

    Docker & Kubernetes : EKS Control Plane (API server) Metrics with Prometheus

    Docker & Kubernetes : Spinnaker on EKS with Halyard

    Docker & Kubernetes : Continuous Delivery Pipelines with Spinnaker and Kubernetes Engine

    Docker & Kubernetes: Multi-node Local Kubernetes cluster - Kubeadm-dind(docker-in-docker)

    Docker & Kubernetes: Multi-node Local Kubernetes cluster - Kubeadm-kind(k8s-in-docker)

    Docker & Kubernetes : nodeSelector, nodeAffinity, taints/tolerations, pod affinity and anti-affinity - Assigning Pods to Nodes

    Docker & Kubernetes : Jenkins-X on EKS

    Docker & Kubernetes : ArgoCD App of Apps with Heml on Kubernetes

    Docker & Kubernetes : ArgoCD on Kubernetes cluster

    Docker & Kubernetes : GitOps with ArgoCD for Continuous Delivery to Kubernetes clusters (minikube) - guestbook





    Terraform



    Introduction to Terraform with AWS elb & nginx

    Terraform Tutorial - terraform format(tf) and interpolation(variables)

    Terraform Tutorial - user_data

    Terraform Tutorial - variables

    Terraform 12 Tutorial - Loops with count, for_each, and for

    Terraform Tutorial - creating multiple instances (count, list type and element() function)

    Terraform Tutorial - State (terraform.tfstate) & terraform import

    Terraform Tutorial - Output variables

    Terraform Tutorial - Destroy

    Terraform Tutorial - Modules

    Terraform Tutorial - Creating AWS S3 bucket / SQS queue resources and notifying bucket event to queue

    Terraform Tutorial - AWS ASG and Modules

    Terraform Tutorial - VPC, Subnets, RouteTable, ELB, Security Group, and Apache server I

    Terraform Tutorial - VPC, Subnets, RouteTable, ELB, Security Group, and Apache server II

    Terraform Tutorial - Docker nginx container with ALB and dynamic autoscaling

    Terraform Tutorial - AWS ECS using Fargate : Part I

    Hashicorp Vault

    HashiCorp Vault Agent

    HashiCorp Vault and Consul on AWS with Terraform

    Ansible with Terraform

    AWS IAM user, group, role, and policies - part 1

    AWS IAM user, group, role, and policies - part 2

    Delegate Access Across AWS Accounts Using IAM Roles

    AWS KMS

    terraform import & terraformer import

    Terraform commands cheat sheet

    Terraform Cloud

    Terraform 14

    Creating Private TLS Certs





    Ansible 2.0



    What is Ansible?

    Quick Preview - Setting up web servers with Nginx, configure environments, and deploy an App

    SSH connection & running commands

    Ansible: Playbook for Tomcat 9 on Ubuntu 18.04 systemd with AWS

    Modules

    Playbooks

    Handlers

    Roles

    Playbook for LAMP HAProxy

    Installing Nginx on a Docker container

    AWS : Creating an ec2 instance & adding keys to authorized_keys

    AWS : Auto Scaling via AMI

    AWS : creating an ELB & registers an EC2 instance from the ELB

    Deploying Wordpress micro-services with Docker containers on Vagrant box via Ansible

    Setting up Apache web server

    Deploying a Go app to Minikube

    Ansible with Terraform





    Jenkins



    Install

    Configuration - Manage Jenkins - security setup

    Adding job and build

    Scheduling jobs

    Managing_plugins

    Git/GitHub plugins, SSH keys configuration, and Fork/Clone

    JDK & Maven setup

    Build configuration for GitHub Java application with Maven

    Build Action for GitHub Java application with Maven - Console Output, Updating Maven

    Commit to changes to GitHub & new test results - Build Failure

    Commit to changes to GitHub & new test results - Successful Build

    Adding code coverage and metrics

    Jenkins on EC2 - creating an EC2 account, ssh to EC2, and install Apache server

    Jenkins on EC2 - setting up Jenkins account, plugins, and Configure System (JAVA_HOME, MAVEN_HOME, notification email)

    Jenkins on EC2 - Creating a Maven project

    Jenkins on EC2 - Configuring GitHub Hook and Notification service to Jenkins server for any changes to the repository

    Jenkins on EC2 - Line Coverage with JaCoCo plugin

    Setting up Master and Slave nodes

    Jenkins Build Pipeline & Dependency Graph Plugins

    Jenkins Build Flow Plugin

    Pipeline Jenkinsfile with Classic / Blue Ocean

    Jenkins Setting up Slave nodes on AWS

    Jenkins Q & A





    Puppet



    Puppet with Amazon AWS I - Puppet accounts

    Puppet with Amazon AWS II (ssh & puppetmaster/puppet install)

    Puppet with Amazon AWS III - Puppet running Hello World

    Puppet Code Basics - Terminology

    Puppet with Amazon AWS on CentOS 7 (I) - Master setup on EC2

    Puppet with Amazon AWS on CentOS 7 (II) - Configuring a Puppet Master Server with Passenger and Apache

    Puppet master /agent ubuntu 14.04 install on EC2 nodes

    Puppet master post install tasks - master's names and certificates setup,

    Puppet agent post install tasks - configure agent, hostnames, and sign request

    EC2 Puppet master/agent basic tasks - main manifest with a file resource/module and immediate execution on an agent node

    Setting up puppet master and agent with simple scripts on EC2 / remote install from desktop

    EC2 Puppet - Install lamp with a manifest ('puppet apply')

    EC2 Puppet - Install lamp with a module

    Puppet variable scope

    Puppet packages, services, and files

    Puppet packages, services, and files II with nginx Puppet templates

    Puppet creating and managing user accounts with SSH access

    Puppet Locking user accounts & deploying sudoers file

    Puppet exec resource

    Puppet classes and modules

    Puppet Forge modules

    Puppet Express

    Puppet Express 2

    Puppet 4 : Changes

    Puppet --configprint

    Puppet with Docker

    Puppet 6.0.2 install on Ubuntu 18.04





    Chef



    What is Chef?

    Chef install on Ubuntu 14.04 - Local Workstation via omnibus installer

    Setting up Hosted Chef server

    VirtualBox via Vagrant with Chef client provision

    Creating and using cookbooks on a VirtualBox node

    Chef server install on Ubuntu 14.04

    Chef workstation setup on EC2 Ubuntu 14.04

    Chef Client Node - Knife Bootstrapping a node on EC2 ubuntu 14.04





    Vagrant



    VirtualBox & Vagrant install on Ubuntu 14.04

    Creating a VirtualBox using Vagrant

    Provisioning

    Networking - Port Forwarding

    Vagrant Share

    Vagrant Rebuild & Teardown

    Vagrant & Ansible





    Redis In-Memory Database



    Redis vs Memcached

    Redis 3.0.1 Install

    Setting up multiple server instances on a Linux host

    Redis with Python

    ELK : Elasticsearch with Redis broker and Logstash Shipper and Indexer



    Git/GitHub Tutorial



    One page express tutorial for GIT and GitHub

    Installation

    add/status/log

    commit and diff

    git commit --amend

    Deleting and Renaming files

    Undoing Things : File Checkout & Unstaging

    Reverting commit

    Soft Reset - (git reset --soft <SHA key>)

    Mixed Reset - Default

    Hard Reset - (git reset --hard <SHA key>)

    Creating & switching Branches

    Fast-forward merge

    Rebase & Three-way merge

    Merge conflicts with a simple example

    GitHub Account and SSH

    Uploading to GitHub

    GUI

    Branching & Merging

    Merging conflicts

    GIT on Ubuntu and OS X - Focused on Branching

    Setting up a remote repository / pushing local project and cloning the remote repo

    Fork vs Clone, Origin vs Upstream

    Git/GitHub Terminologies

    Git/GitHub via SourceTree I : Commit & Push

    Git/GitHub via SourceTree II : Branching & Merging

    Git/GitHub via SourceTree III : Git Work Flow

    Git/GitHub via SourceTree IV : Git Reset

    Git Cheat sheet - quick command reference






    Subversion

    Subversion Install On Ubuntu 14.04

    Subversion creating and accessing I

    Subversion creating and accessing II



    Powershell 4 Tutorial



    Powersehll : Introduction

    Powersehll : Help System

    Powersehll : Running commands

    Powersehll : Providers

    Powersehll : Pipeline

    Powersehll : Objects

    Powershell : Remote Control

    Windows Management Instrumentation (WMI)

    How to Enable Multiple RDP Sessions in Windows 2012 Server

    How to install and configure FTP server on IIS 8 in Windows 2012 Server

    How to Run Exe as a Service on Windows 2012 Server

    SQL Inner, Left, Right, and Outer Joins











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